SMTL ID : 4mk4.1

S197C variant of human ferrochelatase.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)

FES.1: 6 residues within 4Å: Chain A: C.132, R.208, S.338, C.339, C.342, C.347 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.132, A:C.339, A:C.342, A:C.347 FES.5: 6 residues within 4Å: Chain B: C.132, R.208, S.338, C.339, C.342, C.347 4 PLIP interactions: 4 interactions with chain B, Metal complexes: B:C.132, B:C.339, B:C.342, B:C.347

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 7 residues within 4Å: Chain A: P.213, Q.214, S.217, W.237 Chain B: P.213, S.217, W.237 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.217, A:S.217 Water bridges: A:Q.214

5 x CHD: CHOLIC ACID(Non-covalent)

CHD.3: 11 residues within 4Å: Chain A: L.25, L.28, L.34, R.51, K.54, I.55, T.134, H.199, V.241, W.246 Ligands: CHD.4 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.25, A:L.34, A:I.55, A:V.241 Water bridges: A:Y.127, A:E.279 Salt bridges: A:R.51, A:K.54 CHD.4: 11 residues within 4Å: Chain A: F.29, L.34, M.35, R.51, P.202, S.204, V.205, R.208, V.241, G.242 Ligands: CHD.3 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.29, A:P.202, A:V.241 Hydrogen bonds: A:S.204 Water bridges: A:R.51 Salt bridges: A:R.208 CHD.6: 8 residues within 4Å: Chain B: F.29, L.34, M.35, I.47, R.50, R.51, V.241 Ligands: CHD.8 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:I.47, B:V.241 Salt bridges: B:R.50, B:R.51 CHD.7: 12 residues within 4Å: Chain B: M.12, F.24, L.28, F.29, L.34, R.51, C.133, H.199, P.202, V.205, V.241, W.246 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:F.24, B:L.28, B:F.29, B:L.34, B:V.241, B:W.246 Hydrogen bonds: B:L.34, B:S.239 CHD.8: 4 residues within 4Å: Chain B: L.43, I.47, R.50 Ligands: CHD.6 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:L.43, B:I.47

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lanzilotta, W.N. et al., S197C variant of human ferrochelatase. To be Published

Release Date

2013-09-25

Peptides

Ferrochelatase, mitochondrial: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Ferrochelatase, mitochondrial