SMTL ID : 4mln.2 (1 other biounit)

Crystal of PhnZ bound to (R)-2-amino-1-hydroxyethylphosphonic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

2 x FE: FE (III) ION(Non-covalent)

FE.1: 7 residues within 4Å: Chain A: Y.24, H.34, H.58, D.59, D.161 Ligands: FE.2, ODV.3 6 PLIP interactions: 5 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:Y.24, A:H.34, A:H.58, A:D.59, A:D.161, H2O.1 FE.2: 6 residues within 4Å: Chain A: H.58, D.59, H.80, H.104 Ligands: FE.1, ODV.3 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.59, A:H.80, A:H.104, H2O.1

1 x ODV: [(1R)-2-amino-1-hydroxyethyl]phosphonic acid(Non-covalent)

ODV.3: 15 residues within 4Å: Chain A: Y.24, D.59, H.62, Y.75, H.80, H.104, V.105, K.108, A.125, S.126, T.129, Q.133, R.158 Ligands: FE.1, FE.2 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:Y.24, A:D.59, A:K.108, A:K.108, A:T.129, A:Q.133, A:Q.133, A:R.158, A:R.158

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

van Staalduinen, L.M. et al., Crystal structure of PhnZ in complex with substrate reveals a di-iron oxygenase mechanism for catabolism of organophosphonates. Proc.Natl.Acad.Sci.USA (2014)

Release Date

2014-04-16

Peptides

Predicted HD phosphohydrolase PhnZ: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Predicted HD phosphohydrolase PhnZ

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