SMTL ID : 4mmf.2 (2 other biounits)

Crystal structure of LeuBAT (delta5 mutant) in complex with mazindol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 6 residues within 4Å: Chain A: G.20, Y.21, V.23, A.351, T.354, S.355 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.351, A:T.354 NA.2: 6 residues within 4Å: Chain A: A.22, D.24, N.27, S.254, N.286, E.290 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.27, A:S.254, A:N.286

1 x 29Q: (5R)-5-(4-chlorophenyl)-2,5-dihydro-3H-imidazo[2,1-a]isoindol-5-ol(Non-covalent)

29Q.3: 13 residues within 4Å: Chain A: Y.21, A.22, D.24, P.101, V.104, A.105, Y.108, F.253, S.254, G.256, F.259, S.355, G.359 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.21, A:Y.108, A:Y.108, A:F.259, A:F.259 Hydrogen bonds: A:Y.108, A:S.355 Water bridges: A:G.26 pi-Stacking: A:Y.108 Halogen bonds: A:P.101

3 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.4: 3 residues within 4Å: Chain A: W.484, F.488 Ligands: BOG.5 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:W.484, A:W.484, A:F.488 Hydrogen bonds: A:W.484 BOG.5: 10 residues within 4Å: Chain A: M.476, E.477, E.478, T.479, W.481, V.483, W.484, I.485, R.487 Ligands: BOG.4 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:W.484, A:W.484, A:I.485 Hydrogen bonds: A:E.477, A:T.479, A:T.479, A:R.487 BOG.6: 8 residues within 4Å: Chain A: L.25, L.29, V.154, F.320, N.397, K.398, L.400, D.401 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.29, A:L.29, A:F.320 Hydrogen bonds: A:K.398, A:K.398, A:D.401

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, H. et al., Structural basis for action by diverse antidepressants on biogenic amine transporters. Nature (2013)

Release Date

2013-10-16

Peptides

Transporter: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Membrane

We predict this structure to be a membrane protein.
Show / Hide

Transporter

Related Entries With Identical Sequence