SMTL ID : 4mnd.1

Crystal structure of Archaeoglobus fulgidus IPCT-DIPPS bifunctional membrane protein

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.66 Å

Oligo State

homo-dimer

Ligands

8 x LFA: EICOSANE(Non-covalent)(Non-functional Binders)

LFA.1: 2 residues within 4Å: Chain A: V.287, I.295 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:V.287, A:I.295 LFA.2: 6 residues within 4Å: Chain A: T.370, V.371, F.374, L.444, T.445 Chain B: L.363 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Hydrophobic interactions: B:L.363, A:F.374, A:L.444 LFA.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) LFA.4: 2 residues within 4Å: Chain A: F.433, W.434 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:F.433, A:W.434 LFA.6: 2 residues within 4Å: Chain B: V.287, I.295 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:V.287, B:I.295 LFA.7: 6 residues within 4Å: Chain A: L.363 Chain B: T.370, V.371, F.374, L.444, T.445 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:L.363, B:F.374, B:L.444 LFA.8: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) LFA.9: 2 residues within 4Å: Chain B: F.433, W.434 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:F.433, B:W.434

2 x MG: MAGNESIUM ION(Non-covalent)

MG.5: 3 residues within 4Å: Chain A: D.325, D.328, D.346 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.325, A:D.325, A:D.346, A:D.346 MG.10: 3 residues within 4Å: Chain B: D.325, D.328, D.346 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:D.325, B:D.325, B:D.346, B:D.346

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nogly, P. et al., X-ray structure of a CDP-alcohol phosphatidyltransferase membrane enzyme and insights into its catalytic mechanism. Nat Commun (2014)

Release Date

2014-07-02

Peptides

CTP L-myo-inositol-1-phosphate cytidylyltransferase/CDP-L-myo-inositol myo-inositolphosphotransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Membrane

We predict this structure to be a membrane protein.
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CTP L-myo-inositol-1-phosphate cytidylyltransferase/CDP-L-myo-inositol myo-inositolphosphotransferase