SMTL ID : 4mnf.1

Crystal structure of BRAF-V600E bound to GDC0879

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-dimer

Ligands

2 x 29L: 2-{4-[(1E)-1-(hydroxyimino)-2,3-dihydro-1H-inden-5-yl]-3-(pyridin-4-yl)-1H-pyrazol-1-yl}ethanol(Non-covalent)

29L.1: 14 residues within 4Å: Chain A: I.56, V.64, A.74, K.76, E.94, L.107, I.120, T.122, Q.123, W.124, C.125, N.173, F.176, D.187 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:V.64, A:A.74, A:K.76, A:T.122, A:W.124, A:F.176, A:F.176, A:D.187 Hydrogen bonds: A:K.76, A:E.94, A:E.94, A:C.125, A:N.173, A:D.187 29L.2: 15 residues within 4Å: Chain B: I.56, V.64, A.74, K.76, E.94, L.98, L.107, I.120, T.122, Q.123, W.124, C.125, N.173, F.176, D.187 14 PLIP interactions: 14 interactions with chain B Hydrophobic interactions: B:V.64, B:K.76, B:L.107, B:I.120, B:T.122, B:W.124, B:F.176, B:F.176, B:F.176 Hydrogen bonds: B:K.76, B:E.94, B:C.125, B:D.187 pi-Stacking: B:F.176

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 2 residues within 4Å: Chain A: K.184 Chain B: K.184 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Haling, J.R. et al., Structure of the BRAF-MEK Complex Reveals a Kinase Activity Independent Role for BRAF in MAPK Signaling. Cancer Cell (2014)

Release Date

2014-06-18

Peptides

Serine/threonine-protein kinase B-raf: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine/threonine-protein kinase B-raf