SMTL ID : 4msx.1

Crystal structure of an essential yeast splicing factor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.87 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: C.94, V.96, C.97, Y.101, H.113, H.119 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.94, A:C.97, A:H.113, A:H.119

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 7 residues within 4Å: Chain A: N.380, R.381, F.382, D.383, N.392, R.393, N.394 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:D.383, A:N.394 Hydrogen bonds: A:N.394 Water bridges: A:F.330, A:N.380

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hadjivassiliou, H. et al., The crystal structure of S. cerevisiae Sad1, a catalytically inactive deubiquitinase that is broadly required for pre-mRNA splicing. Rna (2014)

Release Date

2014-04-16

Peptides

Pre-mRNA-splicing factor SAD1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Pre-mRNA-splicing factor SAD1