SMTL ID : 4mvf.1

Crystal Structure of Plasmodium falciparum CDPK2 complexed with inhibitor staurosporine

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x STU: STAUROSPORINE(Non-covalent)

STU.1: 16 residues within 4Å: Chain A: L.65, G.66, Q.67, G.68, V.73, A.86, K.88, E.134, L.135, C.136, S.137, G.138, E.183, L.186, I.199, D.200 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.65, A:L.65, A:K.88, A:L.186 Hydrogen bonds: A:C.136, A:E.140

3 x CA: CALCIUM ION(Non-covalent)

CA.2: 5 residues within 4Å: Chain A: D.370, D.372, S.374, T.376, E.381 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.370, A:D.372, A:S.374, A:T.376, H2O.8 CA.3: 5 residues within 4Å: Chain A: D.442, D.444, N.446, K.448, E.453 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.442, A:D.444, A:K.448, A:E.453, H2O.3 CA.4: 5 residues within 4Å: Chain A: D.480, N.482, D.484, E.486, E.491 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.480, A:D.484, A:E.486, A:E.491, H2O.2

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 2 residues within 4Å: Chain A: N.206, L.207 1 PLIP interactions: 1 interactions with chain A Water bridges: A:N.206

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lauciello, L. et al., P. falciparum Calcium-Dependent Protein Kinase 2 (PfCDPK2): First Crystal Structure and Virtual Ligand Screening. To be Published

Release Date

2014-09-03

Peptides

Calcium-dependent protein kinase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Calcium-dependent protein kinase 2