SMTL ID : 4n12.1

Crystal structure of human E18D DJ-1 in complex with Cu

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.48 Å

Oligo State

homo-dimer

Ligands

2 x CU: COPPER (II) ION(Non-covalent)

CU.1: 3 residues within 4Å: Chain A: C.53 Chain B: C.53 Ligands: CU.3 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Metal complexes: A:C.53, B:C.53 CU.3: 3 residues within 4Å: Chain A: C.53 Chain B: C.53 Ligands: CU.1 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Metal complexes: A:C.53, B:C.53

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 7 residues within 4Å: Chain A: E.15, R.48, C.106, H.126, P.158 Chain B: R.28, P.184 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:R.28, B:R.28, A:R.48 Water bridges: A:R.48 EDO.4: 7 residues within 4Å: Chain A: R.28, P.184 Chain B: E.15, R.48, C.106, H.126, P.158 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:R.48, A:R.28, A:R.28 Water bridges: B:R.48

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Girotto, S. et al., DJ-1 Is a Copper Chaperone Acting on SOD1 Activation. J.Biol.Chem. (2014)

Release Date

2014-03-05

Peptides

Protein DJ-1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Protein DJ-1