SMTL ID : 4n6k.1

Crystal structure of a TRAP periplasmic solute binding protein from Desulfovibrio salexigens DSM2638, Target EFI-510113 (Desal_0342), complex with diglycerolphosphate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

monomer

Ligands

1 x X3X: bis[(2S)-2,3-dihydroxypropyl] hydrogen phosphate(Non-covalent)

X3X.1: 16 residues within 4Å: Chain A: V.38, F.39, S.40, E.43, Y.77, E.94, D.95, F.98, Y.151, R.154, R.174, P.176, Y.181, W.197, T.218, T.222 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:V.38, A:S.40, A:Y.77, A:E.94, A:D.95, A:D.95, A:R.154, A:Y.181, A:T.218, A:T.218 Salt bridges: A:R.154, A:R.174

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vetting, M.W. et al., Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes. Biochemistry (2015)

Release Date

2013-11-13

Peptides

TRAP dicarboxylate transporter-DctP subunit: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

TRAP dicarboxylate transporter-DctP subunit