SMTL ID : 4n8j.3 (3 other biounits)

F60M mutant, RipA structure

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.01 Å

Oligo State

monomer

Ligands

1 x COA: COENZYME A(Covalent)

COA.1: 24 residues within 4Å: Chain A: F.68, M.96, E.97, T.98, F.121, T.123, A.124, V.125, R.127, F.149, M.233, P.234, R.236, V.263, E.285, V.286, F.316, M.318, A.358, S.370, E.371, H.372, G.383, Q.384 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:V.263 Hydrogen bonds: A:E.97, A:E.97, A:A.124, A:E.371, A:E.371, A:E.371, A:Q.384 Water bridges: A:R.127, A:R.127, A:S.370 Salt bridges: A:R.127, A:R.236

3 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 4 residues within 4Å: Chain A: A.124, R.127, R.131, H.372 7 PLIP interactions: 7 interactions with chain A Water bridges: A:A.124, A:R.131, A:R.131, A:R.131 Salt bridges: A:R.127, A:R.131, A:H.372 PO4.3: 2 residues within 4Å: Chain A: R.154, E.159 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.159 Water bridges: A:R.154 Salt bridges: A:R.154 PO4.4: 8 residues within 4Å: Chain A: N.148, H.150, Q.151, N.342, D.343, P.344, D.386, R.389 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Q.151 Water bridges: A:H.150, A:H.150, A:R.389, A:R.389 Salt bridges: A:H.150, A:R.389

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Torres, R. et al., Structural snapshots along the reaction pathway of Yersinia pestis RipA, a putative butyryl-CoA transferase. Acta Crystallogr.,Sect.D (2014)

Release Date

2014-04-09

Peptides

Putative 4-hydroxybutyrate coenzyme A transferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Putative 4-hydroxybutyrate coenzyme A transferase

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