SMTL ID : 4na0.3 (2 other biounits)

Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain with ADPRibose

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

2 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 3 residues within 4Å: Chain A: S.225, K.228, K.231 Ligand excluded by PLIP IOD.2: 2 residues within 4Å: Chain A: Y.77, A.88 Ligand excluded by PLIP

1 x AR6: [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE(Non-covalent)

AR6.3: 18 residues within 4Å: Chain A: T.281, I.282, E.283, F.294, A.295, N.296, G.301, V.309, Q.310, E.311, E.312, Y.351, N.425, G.427, G.429, A.430, F.431, F.458 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:I.282, A:E.283, A:N.296, A:E.311, A:E.312, A:E.312, A:Y.348, A:Y.351, A:N.425, A:G.427, A:G.429, A:A.430, A:F.431 pi-Stacking: A:F.458, A:F.458

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, Z. et al., Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase. Plos One (2014)

Release Date

2014-01-29

Peptides

Poly(ADP-ribose) glycohydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Poly(ADP-ribose) glycohydrolase

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