SMTL ID : 4nb5.1

Crystal Structure of a transcriptional regulator

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.64 Å

Oligo State

homo-tetramer

Ligands

2 x 2JT: 1,3-dihydroxypropan-2-yl octadecanoate(Non-covalent)

2JT.1: 15 residues within 4Å: Chain A: Q.76, F.77, E.106, R.107, R.109, A.110, E.113 Chain B: Y.26, R.30, F.77, F.79, G.103, E.104, E.106, R.107 9 PLIP interactions: 6 interactions with chain B, 3 interactions with chain A Hydrophobic interactions: B:Y.26, B:R.30, B:F.79, A:R.109 Hydrogen bonds: B:E.104, B:E.104, B:R.107 Water bridges: A:R.107 Salt bridges: A:R.107 2JT.2: 14 residues within 4Å: Chain C: Y.26, R.30, L.32, F.79, F.100, G.103, E.104 Chain D: E.106, R.107, R.109, A.110, E.113, L.114, L.143 9 PLIP interactions: 6 interactions with chain C, 3 interactions with chain D Hydrophobic interactions: C:R.30, C:L.32, C:F.79, D:E.106, D:L.114 Hydrogen bonds: C:F.100, C:E.104, C:E.104 Salt bridges: D:R.107

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Radhakrishnan, A. et al., Crystal Structure of the Transcriptional Regulator Rv0678 of Mycobacterium tuberculosis. J.Biol.Chem. (2014)

Release Date

2014-04-23

Peptides

DNA binding protein: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

DNA binding protein