SMTL ID : 4nd7.1

Crystal structure of apo 3-nitro-tyrosine tRNA synthetase (5B) in the closed form

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 1 residues within 4Å: Chain A: D.27 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.27 NA.3: 1 residues within 4Å: Chain B: D.27 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:D.27 Water bridges: B:D.27

2 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.2: 3 residues within 4Å: Chain A: C.70, Y.151, Q.155 No protein-ligand interaction detected (PLIP) BME.4: 3 residues within 4Å: Chain B: C.70, Y.151, Q.155 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cooley, R.B. et al., Structural Basis of Improved Second-Generation 3-Nitro-tyrosine tRNA Synthetases. Biochemistry (2014)

Release Date

2014-03-19

Peptides

Tyrosine--tRNA ligase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Tyrosine--tRNA ligase

Related Entries With Identical Sequence