SMTL ID : 4neu.1 (1 other biounit)

X-ray structure of Receptor Interacting Protein 1 (RIP1)kinase domain with a 1-aminoisoquinoline inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.57 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: S.23, F.26, L.27 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:S.23, A:F.26

1 x Q1A: 1-[4-(1-aminoisoquinolin-5-yl)phenyl]-3-(5-tert-butyl-1,2-oxazol-3-yl)urea(Non-covalent)

Q1A.2: 19 residues within 4Å: Chain A: L.32, V.40, I.52, E.72, M.75, M.76, L.79, V.84, V.85, M.101, E.102, Y.103, M.104, L.154, I.163, A.164, D.165, L.166, L.168 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:L.32, A:V.40, A:I.52, A:I.52, A:L.79, A:V.84, A:V.85, A:L.154, A:A.164, A:D.165, A:L.166, A:L.168 Hydrogen bonds: A:E.72, A:E.72, A:M.104, A:M.104, A:D.165 Water bridges: A:L.168

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Harris, P.A. et al., Discovery of Small Molecule RIP1 Kinase Inhibitors for the Treatment of Pathologies Associated with Necroptosis. ACS Med Chem Lett (2013)

Release Date

2013-11-20

Peptides

Receptor-interacting serine/threonine-protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Receptor-interacting serine/threonine-protein kinase 1

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