SMTL ID : 4nfz.4 (3 other biounits)

Crystal structure of polymerase subunit PA N-terminal endonuclease domain from bat-derived influenza virus H17N10

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-hexamer

Ligands

6 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain A: H.41, D.108, E.119, I.120 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.41, A:D.108, A:E.119, A:I.120 MN.2: 4 residues within 4Å: Chain B: H.41, D.108, E.119, I.120 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.41, B:D.108, B:E.119, B:I.120 MN.3: 4 residues within 4Å: Chain C: H.41, D.108, E.119, I.120 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:H.41, C:D.108, C:E.119, C:I.120 MN.4: 4 residues within 4Å: Chain D: H.41, D.108, E.119, I.120 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:H.41, D:D.108, D:E.119, D:I.120 MN.5: 4 residues within 4Å: Chain E: H.41, D.108, E.119, I.120 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:H.41, E:D.108, E:E.119, E:I.120 MN.6: 4 residues within 4Å: Chain F: H.41, D.108, E.119, I.120 4 PLIP interactions: 4 interactions with chain F Metal complexes: F:H.41, F:D.108, F:E.119, F:I.120

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tefsen, B. et al., The N-Terminal Domain of PA from Bat-Derived Influenza-Like Virus H17N10 Has Endonuclease Activity. J.Virol. (2014)

Release Date

2013-12-18

Peptides

Polymerase PA: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

C
A

D
C

E
A

F
C

Polymerase PA

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