SMTL ID : 4ngq.1

Crystal Structure of Glutamate Carboxypeptidase II in a complex with urea-based inhibitor

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.08 Å
Oligo State
homo-dimer
Ligands
8 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
2 x NAG- NAG- BMA- MAN- MAN: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
4 x ZN: ZINC ION(Non-covalent)
2 x CL: CHLORIDE ION(Non-functional Binders)
2 x CA: CALCIUM ION(Non-covalent)
2 x J37: N-({(1S)-6-(4-bromobenzyl)-1-carboxy-7,47-dioxo-52-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]-10,13,16,19,22,25,28,31,34,37,40,43-dodecaoxa-6,46-diazadopentacont-1-yl}carbamoyl)-L-glutamic acid(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Tykvart, J. et al., Rational design of urea-based glutamate carboxypeptidase II (GCPII) inhibitors as versatile tools for specific drug targeting and delivery. Bioorg.Med.Chem. (2014)
Release Date
2014-06-18
Peptides
Glutamate carboxypeptidase 2: AB
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
A

Glutamate carboxypeptidase 2

Toggle Identical (AB)

Related Entries With Identical Sequence

3rbu.1 | 4ngm.1 | 4ngn.1 | 4ngp.1 | 4ngr.1 | 4ngs.1 | 4ngt.1 | 4x3r.1