- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.70 Å
- Oligo State
- homo-12-mer
- Ligands
- 24 x CO: COBALT (II) ION(Non-covalent)
- 12 x CO3: CARBONATE ION(Non-functional Binders)
CO3.3: 9 residues within 4Å:- Chain A: H.82, D.236, E.265, E.266, D.307, H.401
- Chain D: H.156
- Ligands: CO.1, CO.2
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:D.236
CO3.7: 10 residues within 4Å:- Chain B: H.82, D.236, E.265, E.266, D.307, M.400, H.401
- Chain K: H.156
- Ligands: CO.5, CO.6
1 PLIP interactions:1 interactions with chain K- Hydrogen bonds: K:H.156
CO3.10: 11 residues within 4Å:- Chain C: H.82, D.236, E.265, E.266, D.307, R.341, M.400, H.401
- Chain F: H.156
- Ligands: CO.8, CO.9
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:D.236, C:R.341
CO3.14: 9 residues within 4Å:- Chain A: H.156
- Chain D: H.82, D.236, E.266, D.307, M.400, H.401
- Ligands: CO.12, CO.13
1 PLIP interactions:1 interactions with chain D- Hydrogen bonds: D:D.236
CO3.18: 9 residues within 4Å:- Chain E: H.82, D.236, E.265, E.266, D.307, H.401
- Chain H: H.156
- Ligands: CO.16, CO.17
1 PLIP interactions:1 interactions with chain E- Hydrogen bonds: E:D.236
CO3.22: 10 residues within 4Å:- Chain C: H.156
- Chain F: H.82, D.236, E.265, E.266, D.307, M.400, H.401
- Ligands: CO.20, CO.21
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:H.156
CO3.25: 11 residues within 4Å:- Chain G: H.82, D.236, E.265, E.266, D.307, R.341, M.400, H.401
- Chain J: H.156
- Ligands: CO.23, CO.24
2 PLIP interactions:2 interactions with chain G- Hydrogen bonds: G:D.236, G:R.341
CO3.29: 9 residues within 4Å:- Chain E: H.156
- Chain H: H.82, D.236, E.266, D.307, M.400, H.401
- Ligands: CO.27, CO.28
1 PLIP interactions:1 interactions with chain H- Hydrogen bonds: H:D.236
CO3.33: 9 residues within 4Å:- Chain I: H.82, D.236, E.265, E.266, D.307, H.401
- Chain L: H.156
- Ligands: CO.31, CO.32
1 PLIP interactions:1 interactions with chain I- Hydrogen bonds: I:D.236
CO3.37: 10 residues within 4Å:- Chain G: H.156
- Chain J: H.82, D.236, E.265, E.266, D.307, M.400, H.401
- Ligands: CO.35, CO.36
1 PLIP interactions:1 interactions with chain G- Hydrogen bonds: G:H.156
CO3.40: 11 residues within 4Å:- Chain B: H.156
- Chain K: H.82, D.236, E.265, E.266, D.307, R.341, M.400, H.401
- Ligands: CO.38, CO.39
2 PLIP interactions:2 interactions with chain K- Hydrogen bonds: K:D.236, K:R.341
CO3.44: 9 residues within 4Å:- Chain I: H.156
- Chain L: H.82, D.236, E.266, D.307, M.400, H.401
- Ligands: CO.42, CO.43
1 PLIP interactions:1 interactions with chain L- Hydrogen bonds: L:D.236
- 9 x NHE: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID(Non-covalent)
NHE.4: 3 residues within 4Å:- Chain A: R.41, E.137, R.139
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:E.137
- Salt bridges: A:R.139
NHE.11: 2 residues within 4Å:- Chain C: E.137, R.139
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:E.137, C:R.139
- Water bridges: C:R.139
- Salt bridges: C:R.139
NHE.15: 3 residues within 4Å:- Chain D: L.136, E.137, R.139
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:L.136
- Salt bridges: D:R.139
NHE.19: 3 residues within 4Å:- Chain E: R.41, E.137, R.139
2 PLIP interactions:2 interactions with chain E- Hydrogen bonds: E:E.137
- Salt bridges: E:R.139
NHE.26: 2 residues within 4Å:- Chain G: E.137, R.139
4 PLIP interactions:4 interactions with chain G- Hydrogen bonds: G:E.137, G:R.139
- Water bridges: G:R.139
- Salt bridges: G:R.139
NHE.30: 3 residues within 4Å:- Chain H: L.136, E.137, R.139
2 PLIP interactions:2 interactions with chain H- Hydrogen bonds: H:L.136
- Salt bridges: H:R.139
NHE.34: 3 residues within 4Å:- Chain I: R.41, E.137, R.139
2 PLIP interactions:2 interactions with chain I- Hydrogen bonds: I:E.137
- Salt bridges: I:R.139
NHE.41: 2 residues within 4Å:- Chain K: E.137, R.139
4 PLIP interactions:4 interactions with chain K- Hydrogen bonds: K:E.137, K:R.139
- Water bridges: K:R.139
- Salt bridges: K:R.139
NHE.45: 3 residues within 4Å:- Chain L: L.136, E.137, R.139
2 PLIP interactions:2 interactions with chain L- Hydrogen bonds: L:L.136
- Salt bridges: L:R.139
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nguyen, D.D. et al., Structural and kinetic bases for the metal preference of the M18 aminopeptidase from Pseudomonas aeruginosa. Biochem.Biophys.Res.Commun. (2014)
- Release Date
- 2014-04-02
- Peptides
- Probable M18 family aminopeptidase 2: ABCDEFGHIJKL
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
AF
BG
CH
DI
AJ
BK
CL
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.70 Å
- Oligo State
- homo-12-mer
- Ligands
- 24 x CO: COBALT (II) ION(Non-covalent)
- 12 x CO3: CARBONATE ION(Non-functional Binders)
- 9 x NHE: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nguyen, D.D. et al., Structural and kinetic bases for the metal preference of the M18 aminopeptidase from Pseudomonas aeruginosa. Biochem.Biophys.Res.Commun. (2014)
- Release Date
- 2014-04-02
- Peptides
- Probable M18 family aminopeptidase 2: ABCDEFGHIJKL
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
AF
BG
CH
DI
AJ
BK
CL
D