SMTL ID : 4njv.2 (1 other biounit)

Crystal structure of multidrug-resistant clinical isolate A02 HIV-1 protease in complex with ritonavir

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

1 x RIT: RITONAVIR(Non-covalent)

RIT.1: 23 residues within 4Å: Chain A: D.25, G.27, A.28, D.29, V.32, G.48, G.49, I.50, T.82, I.84 Chain B: R.8, D.25, G.27, A.28, D.29, D.30, V.32, G.48, G.49, I.50, P.81, T.82, I.84 18 PLIP interactions: 8 interactions with chain A, 10 interactions with chain B Hydrophobic interactions: A:V.32, A:T.82, A:I.84, B:I.50, B:I.50, B:P.81, B:T.82, B:I.84 Hydrogen bonds: A:D.25, A:G.27, A:D.29, A:G.48, B:G.27, B:D.29, B:D.30 Water bridges: A:I.50, B:R.8 pi-Cation interactions: B:R.8

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yedidi, R.S. et al., A Conserved Hydrogen-Bonding Network of P2 bis-Tetrahydrofuran-Containing HIV-1 Protease Inhibitors (PIs) with a Protease Active-Site Amino Acid Backbone Aids in Their Activity against PI-Resistant HIV. Antimicrob.Agents Chemother. (2014)

Release Date

2014-04-02

Peptides

Protease: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Protease

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