SMTL ID : 4nu5.1

Crystal Structure of PTDH R301A

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

homo-dimer

Ligands

2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 24 residues within 4Å: Chain A: K.76, G.77, L.100, T.104, G.152, M.153, G.154, A.155, I.156, H.174, A.175, A.176, K.177, A.207, L.208, P.209, T.214, P.235, C.236, R.237, D.261, H.292, G.294, S.295 24 PLIP interactions: 24 interactions with chain A Hydrophobic interactions: A:L.100, A:L.100, A:T.104, A:I.156 Hydrogen bonds: A:T.104, A:M.153, A:M.153, A:G.154, A:A.155, A:I.156, A:A.176, A:K.177, A:P.235, A:G.294, A:S.295 Water bridges: A:K.76, A:K.76, A:D.79, A:L.210, A:L.210, A:R.237, A:A.296 Salt bridges: A:K.76, A:K.76 NAD.2: 26 residues within 4Å: Chain B: K.76, G.77, L.100, T.104, L.151, G.152, M.153, G.154, A.155, I.156, A.175, A.176, K.177, A.207, L.208, P.209, T.214, L.217, P.235, C.236, R.237, D.261, V.262, H.292, G.294, S.295 21 PLIP interactions: 21 interactions with chain B Hydrophobic interactions: B:L.100, B:T.104, B:I.156 Hydrogen bonds: B:M.153, B:M.153, B:A.155, B:I.156, B:A.176, B:K.177, B:D.261, B:D.261, B:G.294, B:S.295 Water bridges: B:K.76, B:D.79, B:G.154, B:G.157, B:L.210, B:R.237 Salt bridges: B:K.76, B:K.76

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hung, J.E. et al., Chemical rescue and inhibition studies to determine the role of arg301 in phosphite dehydrogenase. Plos One (2014)

Release Date

2014-03-12

Peptides

Phosphonate dehydrogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Phosphonate dehydrogenase