SMTL ID : 4o02.1

AlphaVBeta3 integrin in complex with monoclonal antibody FAB fragment.

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 3.61 Å
Oligo State
hetero-1-1-1-1-mer
Ligands
1 x NAG- NAG- BMA- MAN- BMA- MAN: beta-D-mannopyranose-(1-4)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG- NAG- BMA- MAN- MAN- MAN: alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
3 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x NAG- NAG- BMA- MAN- MAN- MAN: alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
5 x MN: MANGANESE (II) ION(Non-covalent)
2 x NO3: NITRATE ION(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Mahalingam, B. et al., Atomic basis for the species-specific inhibition of alpha V integrins by monoclonal antibody 17E6 is revealed by the crystal structure of alpha V beta 3 ectodomain-17E6 Fab complex. J.Biol.Chem. (2014)
Release Date
2014-04-02
Peptides
Integrin alpha-V: A
Integrin beta-3: B
17E6 light chain: C
17E6 heavy chain: D
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
L
D
H

Integrin alpha-V

Integrin beta-3

17E6 light chain

17E6 heavy chain

Related Entries With Identical Sequence

4g1m.1 | 4mmx.1 | 4mmy.1 | 4mmz.1 | 6avq.1 | 6avr.1 | 6avu.1 | 8vs6.1