SMTL ID : 4o1y.1

Crystal structure of Porcine Pancreatic Phospholipase A2 in complex with 1-Naphthaleneacetic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x NLA: NAPHTHALEN-1-YL-ACETIC ACID(Non-covalent)

NLA.1: 10 residues within 4Å: Chain A: R.6, I.9, P.18, L.19, F.22, N.23, G.30, L.31, Y.69, F.106 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:R.6, A:I.9, A:P.18, A:F.22, A:F.106 Hydrogen bonds: A:L.31, A:Y.69 Water bridges: A:G.30

2 x CA: CALCIUM ION(Non-covalent)

CA.2: 3 residues within 4Å: Chain A: E.71, S.72, E.92 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.71, A:S.72, A:E.92 CA.3: 4 residues within 4Å: Chain A: Y.28, G.30, G.32, D.49 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:Y.28, A:G.30, A:G.32, H2O.1, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dileep, K.V. et al., Crystal structure of Porcine Pancreatic Phospholipase A2 in complex with 1-Naphthaleneacetic acid. To be published

Release Date

2014-01-29

Peptides

Phospholipase A2, major isoenzyme: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phospholipase A2, major isoenzyme

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