SMTL ID : 4o48.1

Crystal structure of cleaved guinea pig L-asparaginase type III in complex with L-aspartate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.29 Å

Oligo State

homo-dimer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 6 residues within 4Å: Chain A: L.78, E.79, D.81, F.84, A.86, H.88 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.86, A:A.86 NA.3: 6 residues within 4Å: Chain B: L.78, E.79, D.81, F.84, A.86, H.88 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:E.79, B:A.86

2 x ASP: ASPARTIC ACID(Non-covalent)

ASP.2: 10 residues within 4Å: Chain A: T.191, T.209, G.211, I.212, R.219, G.221, D.222, T.242, G.243, G.245 10 PLIP interactions: 9 interactions with chain A, 1 Ligand-Ligand interactions Hydrophobic interactions: A:I.212 Hydrogen bonds: A:T.191, A:D.222, A:D.222, A:G.243, A:G.245, D.2 Water bridges: A:N.85, A:G.221 Salt bridges: A:R.219 ASP.4: 11 residues within 4Å: Chain B: T.191, T.209, G.211, I.212, R.219, G.221, D.222, S.223, T.242, G.243, G.245 11 PLIP interactions: 10 interactions with chain B, 1 Ligand-Ligand interactions Hydrophobic interactions: B:I.212 Hydrogen bonds: B:T.191, B:T.191, B:D.222, B:T.242, B:G.243, B:G.243, B:G.245, D.4 Water bridges: B:G.221 Salt bridges: B:R.219

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schalk, A.M. et al., Structural and Kinetic Characterization of Guinea Pig l-Asparaginase Type III. Biochemistry (2014)

Release Date

2014-04-09

Peptides

Uncharacterized protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Uncharacterized protein

Related Entries With Identical Sequence