- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x TMP: THYMIDINE-5'-PHOSPHATE(Non-covalent)
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
ADP.2: 13 residues within 4Å:- Chain A: K.13, M.15, L.23, H.68, E.81, K.82, L.83, M.85, K.122, K.175, E.177, A.189, D.190
10 PLIP interactions:10 interactions with chain A- Hydrogen bonds: A:K.13, A:H.68, A:L.83, A:E.177, A:E.177, A:D.190
- Salt bridges: A:K.13, A:K.13, A:K.122, A:K.175
ADP.7: 13 residues within 4Å:- Chain B: K.13, M.15, L.23, H.68, E.81, K.82, L.83, M.85, K.122, K.175, E.177, A.189, D.190
11 PLIP interactions:11 interactions with chain B- Hydrogen bonds: B:K.13, B:H.68, B:E.81, B:L.83, B:E.177, B:E.177, B:D.190
- Salt bridges: B:K.13, B:K.13, B:K.122, B:K.175
- 2 x ASP: ASPARTIC ACID(Non-covalent)
ASP.3: 7 residues within 4Å:- Chain A: T.32, A.33, F.34, D.35, K.210, R.214
- Ligands: TMP.1
12 PLIP interactions:8 interactions with chain A, 4 Ligand-Ligand interactions- Hydrogen bonds: A:F.34, A:D.35, A:R.214, D.3, D.3, D.3
- Water bridges: A:K.210, A:R.214, A:R.214, D.3
- Salt bridges: A:K.210, A:R.214
ASP.8: 7 residues within 4Å:- Chain B: T.32, A.33, F.34, D.35, K.210, R.214
- Ligands: TMP.6
13 PLIP interactions:9 interactions with chain B, 4 Ligand-Ligand interactions- Hydrogen bonds: B:F.34, B:D.35, B:R.214, D.8, D.8, D.8
- Water bridges: B:T.32, B:K.210, B:R.214, B:R.214, D.8
- Salt bridges: B:K.210, B:R.214
- 4 x ACT: ACETATE ION(Non-functional Binders)
ACT.4: 4 residues within 4Å:- Chain A: E.89, V.91, Y.120
- Ligands: TMP.1
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:V.91, A:Y.120
ACT.5: 5 residues within 4Å:- Chain A: R.103, P.129, M.130
- Chain B: R.103
- Ligands: ACT.10
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:M.130
- Water bridges: A:R.103
- Salt bridges: A:R.103, B:R.103
ACT.9: 4 residues within 4Å:- Chain B: E.89, V.91, Y.120
- Ligands: TMP.6
2 PLIP interactions:2 interactions with chain B- Hydrophobic interactions: B:V.91, B:Y.120
ACT.10: 5 residues within 4Å:- Chain A: R.103
- Chain B: R.103, P.129, M.130
- Ligands: ACT.5
4 PLIP interactions:1 interactions with chain A, 3 interactions with chain B- Salt bridges: A:R.103, B:R.103
- Hydrogen bonds: B:M.130
- Water bridges: B:R.103
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Manjunath, K. et al., SAICAR synthetase (Type-2) in complex with ADP, ASP and TMP. To be Published
- Release Date
- 2014-12-31
- Peptides
- Phosphoribosylaminoimidazole-succinocarboxamide synthase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x TMP: THYMIDINE-5'-PHOSPHATE(Non-covalent)
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x ASP: ASPARTIC ACID(Non-covalent)
- 4 x ACT: ACETATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Manjunath, K. et al., SAICAR synthetase (Type-2) in complex with ADP, ASP and TMP. To be Published
- Release Date
- 2014-12-31
- Peptides
- Phosphoribosylaminoimidazole-succinocarboxamide synthase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A