- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
ADP.2: 13 residues within 4Å:- Chain A: K.13, M.15, L.23, H.68, E.81, K.82, L.83, M.85, K.122, K.175, E.177, A.189, D.190
12 PLIP interactions:12 interactions with chain A- Hydrogen bonds: A:K.13, A:H.68, A:E.81, A:L.83, A:E.177, A:E.177, A:D.190, A:D.190
- Salt bridges: A:K.13, A:K.13, A:K.122, A:K.175
ADP.7: 13 residues within 4Å:- Chain B: K.13, M.15, L.23, H.68, E.81, K.82, L.83, M.85, K.122, K.175, E.177, A.189, D.190
11 PLIP interactions:11 interactions with chain B- Hydrogen bonds: B:K.13, B:H.68, B:L.83, B:E.177, B:E.177, B:D.190, B:D.190
- Salt bridges: B:K.13, B:K.13, B:K.122, B:K.175
- 2 x U5P: URIDINE-5'-MONOPHOSPHATE(Non-covalent)
U5P.3: 17 residues within 4Å:- Chain A: E.89, V.91, R.93, A.97, G.98, S.99, Y.120, D.173, F.174, K.175, D.195, T.196, C.197, R.198, R.214
- Ligands: UDP.1, PO4.5
9 PLIP interactions:9 interactions with chain A- Hydrogen bonds: A:S.99, A:D.195, A:C.197, A:R.214, A:R.214
- Water bridges: A:C.197, A:C.197
- Salt bridges: A:R.93, A:R.198
U5P.8: 17 residues within 4Å:- Chain B: E.89, V.91, R.93, A.97, G.98, S.99, Y.120, D.173, F.174, K.175, D.195, T.196, C.197, R.198, R.214
- Ligands: UDP.6, PO4.10
9 PLIP interactions:9 interactions with chain B- Hydrogen bonds: B:S.99, B:D.195, B:C.197, B:R.214, B:R.214
- Water bridges: B:C.197, B:C.197
- Salt bridges: B:R.93, B:R.198
- 2 x ACT: ACETATE ION(Non-functional Binders)
ACT.4: 6 residues within 4Å:- Chain A: R.103, Y.120, P.129, M.130
- Chain B: R.103
- Ligands: ACT.9
3 PLIP interactions:2 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:M.130
- Salt bridges: A:R.103, B:R.103
ACT.9: 6 residues within 4Å:- Chain A: R.103
- Chain B: R.103, Y.120, P.129, M.130
- Ligands: ACT.4
3 PLIP interactions:2 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:M.130
- Salt bridges: B:R.103, A:R.103
- 2 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.5: 7 residues within 4Å:- Chain A: T.32, A.33, F.34, K.210, R.214
- Ligands: UDP.1, U5P.3
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:T.32, A:F.34
- Salt bridges: A:K.210, A:R.214
PO4.10: 7 residues within 4Å:- Chain B: T.32, A.33, F.34, K.210, R.214
- Ligands: UDP.6, U5P.8
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:T.32, B:F.34
- Salt bridges: B:K.210, B:R.214
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Manjunath, K. et al., SAICAR synthetase (Type-2) in complex with ADP and UDP/UMP. To be Published
- Release Date
- 2014-12-31
- Peptides
- Phosphoribosylaminoimidazole-succinocarboxamide synthase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x U5P: URIDINE-5'-MONOPHOSPHATE(Non-covalent)
- 2 x ACT: ACETATE ION(Non-functional Binders)
- 2 x PO4: PHOSPHATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Manjunath, K. et al., SAICAR synthetase (Type-2) in complex with ADP and UDP/UMP. To be Published
- Release Date
- 2014-12-31
- Peptides
- Phosphoribosylaminoimidazole-succinocarboxamide synthase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A