SMTL ID : 4o8o.1

Crystal structure of SthAraf62A, a GH62 family alpha-L-arabinofuranosidase from Streptomyces thermoviolaceus, bound to alpha-L-arabinose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.21 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 2 residues within 4Å: Chain A: Q.272, H.336 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:H.336, H2O.1, H2O.1, H2O.1, H2O.1

1 x AHR: alpha-L-arabinofuranose(Non-covalent)

AHR.2: 11 residues within 4Å: Chain A: K.108, D.109, T.124, W.132, A.160, Q.177, I.216, D.217, E.269, H.336, Y.370 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:K.108, A:Q.177, A:Q.177, A:D.217, A:H.336, A:Y.370, A:Y.370 Water bridges: A:R.295, A:R.295 Salt bridges: A:K.108

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, W. et al., Elucidation of the molecular basis for arabinoxylan-debranching activity of a thermostable family GH62 alpha-l-arabinofuranosidase from Streptomyces thermoviolaceus. Appl.Environ.Microbiol. (2014)

Release Date

2014-07-02

Peptides

Alpha-L-arabinofuranosidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Alpha-L-arabinofuranosidase

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