SMTL ID : 4o94.1 (3 other biounits)

Crystal structure of a trap periplasmic solute binding protein from Rhodopseudomonas palustris HaA2 (RPB_3329), Target EFI-510223, with bound succinate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 7 residues within 4Å: Chain A: V.34, S.68, G.72, D.73, A.191, F.192, S.193 Ligand excluded by PLIP CL.2: 4 residues within 4Å: Chain A: Q.127, L.130, A.142, Y.143 Ligand excluded by PLIP

1 x SIN: SUCCINIC ACID(Non-covalent)

SIN.3: 14 residues within 4Å: Chain A: V.34, V.35, K.41, D.73, S.91, K.94, N.146, R.169, Q.171, F.192, N.209, N.213, I.234, Y.236 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:F.192 Hydrogen bonds: A:N.146, A:N.209, A:N.213, A:Y.236 Water bridges: A:K.94, A:Q.171 Salt bridges: A:K.41, A:K.94, A:K.94, A:R.169

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vetting, M.W. et al., Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes. Biochemistry (2015)

Release Date

2014-01-22

Peptides

TRAP dicarboxylate transporter DctP subunit: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

TRAP dicarboxylate transporter DctP subunit

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