SMTL ID : 4oag.1

Crystal structure of the cytosolic domain of mouse MiD51 bound to ADP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 15 residues within 4Å: Chain A: S.59, G.60, S.61, H.73, Q.75, I.77, L.185, V.196, R.198, S.212, L.213, R.214, P.215, K.240, A.254 24 PLIP interactions: 24 interactions with chain A Hydrogen bonds: A:S.59, A:S.59, A:S.61, A:S.61, A:S.61, A:R.198, A:R.198, A:S.212 Water bridges: A:Q.75, A:Q.75, A:D.183, A:L.213, A:R.214, A:K.240, A:K.240, A:A.254, A:A.254, A:A.254, A:S.255, A:S.255 Salt bridges: A:H.73, A:R.214, A:K.240, A:K.240 ADP.3: 15 residues within 4Å: Chain B: S.59, G.60, S.61, H.73, Q.75, I.77, L.185, V.196, R.198, S.212, L.213, R.214, P.215, K.240, A.254 21 PLIP interactions: 21 interactions with chain B Hydrogen bonds: B:S.59, B:S.59, B:S.61, B:S.61, B:S.61, B:R.198, B:S.212 Water bridges: B:S.61, B:Q.75, B:Q.75, B:R.214, B:R.214, B:R.214, B:K.240, B:A.254, B:A.254, B:A.254 Salt bridges: B:H.73, B:R.214, B:K.240, B:K.240

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: Y.57 Chain B: R.41, R.45 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Water bridges: B:R.41, A:R.41 Salt bridges: B:R.41, B:R.45

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Loson, O.C. et al., The Mitochondrial Fission Receptor MiD51 Requires ADP as a Cofactor. Structure (2014)

Release Date

2014-01-22

Peptides

Mitochondrial dynamic protein MID51: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Mitochondrial dynamic protein MID51

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