- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x A- A- A: RNA (5'-R(P*A*AP*A)-2')(Non-covalent)
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
ADP.2: 18 residues within 4Å:- Chain A: I.351, A.352, T.354, I.359, A.370, K.372, V.414, T.415, L.416, C.417, T.420, Q.469, N.470, L.472, D.483, D.485
- Ligands: MG.3, MG.4
8 PLIP interactions:8 interactions with chain A- Hydrogen bonds: A:T.354, A:T.415, A:C.417
- Water bridges: A:Q.467, A:Q.469, A:D.483
- Salt bridges: A:K.372, A:K.372
ADP.6: 18 residues within 4Å:- Chain B: I.351, A.352, T.354, I.359, A.370, K.372, V.414, T.415, L.416, C.417, T.420, Q.469, N.470, L.472, D.483, D.485
- Ligands: MG.7, MG.8
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:T.354, B:T.415, B:C.417
- Water bridges: B:Q.467, B:Q.469, B:D.483
- Salt bridges: B:K.372, B:K.372
- 4 x MG: MAGNESIUM ION(Non-covalent)
MG.3: 6 residues within 4Å:- Chain A: D.465, Q.467, N.470, D.483
- Ligands: ADP.2, MG.4
2 PLIP interactions:1 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:D.483, H2O.1
MG.4: 5 residues within 4Å:- Chain A: D.465, D.483, D.485
- Ligands: ADP.2, MG.3
3 PLIP interactions:3 interactions with chain A- Metal complexes: A:D.483, A:D.483, A:D.485
MG.7: 6 residues within 4Å:- Chain B: D.465, Q.467, N.470, D.483
- Ligands: ADP.6, MG.8
2 PLIP interactions:1 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:D.483, H2O.7
MG.8: 5 residues within 4Å:- Chain B: D.465, D.483, D.485
- Ligands: ADP.6, MG.7
3 PLIP interactions:3 interactions with chain B- Metal complexes: B:D.483, B:D.483, B:D.485
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Han, Y. et al., Structure of human RNase L reveals the basis for regulated RNA decay in the IFN response. Science (2014)
- Release Date
- 2014-03-12
- Peptides
- 2-5A-dependent ribonuclease: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x A- A- A: RNA (5'-R(P*A*AP*A)-2')(Non-covalent)
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- 4 x MG: MAGNESIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Han, Y. et al., Structure of human RNase L reveals the basis for regulated RNA decay in the IFN response. Science (2014)
- Release Date
- 2014-03-12
- Peptides
- 2-5A-dependent ribonuclease: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
C