SMTL ID : 4oc2.1

X-ray structure of of human glutamate carboxypeptidase II (GCPII) in a complex with CEIBzL, a urea-based inhibitor N~2~-{[(1S)-1-carboxybut-3-yn-1-yl]carbamoyl}-N~6~-(4-iodobenzoyl)-L-lysine

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.65 Å
Oligo State
homo-dimer
Ligands
2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
2 x NAG- FUC: alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
2 x NAG- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
2 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
2 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
4 x ZN: ZINC ION(Non-covalent)
2 x CA: CALCIUM ION(Non-covalent)
2 x CL: CHLORIDE ION(Non-functional Binders)
2 x 2QQ: N~2~-{[(1S)-1-carboxybut-3-yn-1-yl]carbamoyl}-N~6~-(4-iodobenzoyl)-L-lysine(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Pavlicek, J. et al., Structural characterization of P1'-diversified urea-based inhibitors of glutamate carboxypeptidase II. Bioorg.Med.Chem.Lett. (2014)
Release Date
2014-05-21
Peptides
Glutamate carboxypeptidase 2: AB
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
A

Glutamate carboxypeptidase 2

Toggle Identical (AB)

Related Entries With Identical Sequence

2oot.1 | 2or4.1 | 2pvv.1 | 2pvw.1 | 2xei.1 | 3bhx.1 | 3bi0.1 | 3bi1.1 | 3d7d.1 | 3d7f.1 | 3d7g.1 | 3d7h.1 | 3iww.1 | 3sjf.1 | 4jyw.1 | 4jz0.1 | 4lqg.1 | 4oc0.1 | 4oc1.1 | 4oc3.1 | 4oc4.1 | 4oc5.1