- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.75 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 2 x COA: COENZYME A(Non-covalent)
COA.2: 32 residues within 4Å:- Chain A: V.10, A.11, A.14, S.15, A.18, R.19, R.22, S.39, F.40, N.42, C.43, L.61, Q.62, F.67, F.71, A.321, N.325, R.329
- Chain B: V.380, Y.388, Y.446, K.454, Q.459, F.462, V.463, N.466, V.533, G.534, L.535, N.538, N.553
- Ligands: FAD.1
16 PLIP interactions:7 interactions with chain B, 9 interactions with chain A- Hydrogen bonds: B:K.454, B:K.454, B:Q.459, B:N.466, B:V.533, A:F.40, A:N.325
- Salt bridges: B:K.454, B:K.454, A:R.19, A:R.22, A:R.22, A:R.329
- Hydrophobic interactions: A:V.10, A:Q.62, A:F.67
COA.4: 29 residues within 4Å:- Chain A: V.380, Y.446, K.454, Q.459, F.462, V.463, N.466, V.533, G.534, L.535, N.538
- Chain B: V.10, A.11, A.14, S.15, A.18, R.19, R.22, S.39, F.40, N.42, C.43, Q.62, F.67, F.71, A.321, N.325, R.329
- Ligands: FAD.3
18 PLIP interactions:8 interactions with chain A, 10 interactions with chain B- Hydrogen bonds: A:K.454, A:K.454, A:Q.459, A:N.466, A:V.533, A:N.538, B:F.40, B:N.325
- Salt bridges: A:K.454, A:K.454, B:R.19, B:R.22, B:R.22, B:R.329
- Hydrophobic interactions: B:V.10, B:A.14, B:Q.62, B:F.67
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lee, K.H. et al., Characterization of the mechanism of the NADH-dependent polysulfide reductase (Npsr) from Shewanella loihica PV-4: Formation of a productive NADH-enzyme complex and its role in the general mechanism of NADH and FAD-dependent enzymes. Biochim.Biophys.Acta (2014)
- Release Date
- 2014-08-20
- Peptides
- FAD-dependent pyridine nucleotide-disulphide oxidoreductase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.75 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 2 x COA: COENZYME A(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lee, K.H. et al., Characterization of the mechanism of the NADH-dependent polysulfide reductase (Npsr) from Shewanella loihica PV-4: Formation of a productive NADH-enzyme complex and its role in the general mechanism of NADH and FAD-dependent enzymes. Biochim.Biophys.Acta (2014)
- Release Date
- 2014-08-20
- Peptides
- FAD-dependent pyridine nucleotide-disulphide oxidoreductase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B