SMTL ID : 4of6.2 (1 other biounit)

Crystal Structure of SYG-1 D1, Crystal form 1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x NAG- FUC: alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-FUC.1: 4 residues within 4Å: Chain A: K.59, R.60, S.77, N.78 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.59, A:N.78

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: R.9, I.10, V.11, A.13 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.9, A:A.13 Water bridges: A:I.10 EDO.3: 2 residues within 4Å: Chain A: N.58, R.60 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.58, A:R.60

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ozkan, E. et al., Extracellular Architecture of the SYG-1/SYG-2 Adhesion Complex Instructs Synaptogenesis. Cell(Cambridge,Mass.) (2014)

Release Date

2014-02-19

Peptides

Protein SYG-1, isoform b: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Protein SYG-1, isoform b

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