SMTL ID : 4oj4.1

Crystal structure of V290M PPARgamma mutant in complex with diclofenac

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x DIF: 2-[2,6-DICHLOROPHENYL)AMINO]BENZENEACETIC ACID(Non-covalent)

DIF.1: 12 residues within 4Å: Chain A: I.82, C.86, R.89, S.90, L.131, L.134, V.140, L.141, I.142, S.143, E.144, M.165 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:R.89, A:L.134 Hydrogen bonds: A:S.143, A:E.144 DIF.4: 12 residues within 4Å: Chain B: I.82, C.86, R.89, S.90, L.131, L.134, V.140, L.141, I.142, S.143, E.144, M.165 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:R.89, B:L.134 Hydrogen bonds: B:S.143, B:E.144

4 x CA: CALCIUM ION(Non-covalent)

CA.2: 1 residues within 4Å: Chain A: N.225 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:N.225, H2O.1, H2O.1, H2O.2, H2O.2 CA.3: 1 residues within 4Å: Chain A: D.61 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.61, H2O.2 CA.5: 1 residues within 4Å: Chain B: N.225 5 PLIP interactions: 1 interactions with chain B, 4 Ligand-Water interactions Metal complexes: B:N.225, H2O.3, H2O.4, H2O.4, H2O.5 CA.6: 1 residues within 4Å: Chain B: D.61 2 PLIP interactions: 1 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.61, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Puhl, A.C. et al., Crystal structure of a PPAR ligand-resistance syndrome mutant. To be Published

Release Date

2015-02-04

Peptides

Peroxisome proliferator-activated receptor gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Peroxisome proliferator-activated receptor gamma