SMTL ID : 4oja.1

Structure of Hydra Cu-Zn superoxide dismutase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.28 Å

Oligo State

homo-dimer

Ligands

2 x CU: COPPER (II) ION(Non-covalent)

CU.1: 5 residues within 4Å: Chain A: H.63, H.65, H.80, V.135, H.137 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.63, A:H.65, A:H.80, A:H.137 CU.4: 5 residues within 4Å: Chain B: H.63, H.65, H.80, V.135, H.137 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.63, B:H.65, B:H.80, B:H.137

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 5 residues within 4Å: Chain A: H.80, H.88, H.97, D.100, T.153 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:H.80, A:H.88, A:H.97, A:D.100, A:D.100 ZN.5: 5 residues within 4Å: Chain B: H.80, H.88, H.97, D.100, T.153 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:H.80, B:H.88, B:H.97, B:D.100, B:D.100

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 3 residues within 4Å: Chain B: Q.66, F.67, R.132 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Q.66 Salt bridges: B:R.132 SO4.6: 3 residues within 4Å: Chain A: Q.66, F.67, R.132 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.66 Salt bridges: A:R.132

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Subhadra, D. et al., Structure of a Cu-Zn Superoxide dismutase at an evolutionary crossroad. To be Published

Release Date

2015-01-28

Peptides

Superoxide dismutase [Cu-Zn]: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Superoxide dismutase [Cu-Zn]