SMTL ID : 4ojf.1

Humanised 3D6 Fab complexed to amyloid beta 1-8

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ASP- ALA- GLU- PHE- ARG- HIS: Amyloid beta A4 protein(Non-covalent)

ASP-ALA-GLU-PHE-ARG-HIS.1: 22 residues within 4Å: Chain A: G.32, M.33, S.34, W.46, S.49, I.50, R.51, Y.58, Y.98, G.103, S.104, S.105 Chain B: D.31, D.33, Y.37, N.39, W.94, G.96, T.97, H.98, F.99, R.101 31 PLIP interactions: 19 interactions with chain B, 12 interactions with chain A Hydrophobic interactions: B:F.99, A:Y.58, A:Y.98, A:Y.98, A:Y.98, A:Y.98, A:Y.98 Hydrogen bonds: B:D.31, B:Y.37, B:Y.37, B:W.94, B:G.96, B:G.96, B:R.101, B:R.101, A:S.49, A:S.49, A:R.51, A:S.105 Water bridges: B:D.33, B:G.96, B:H.98, B:F.99, B:R.101, A:Y.98, A:Y.98 Salt bridges: B:D.31, B:D.33, B:R.101, B:R.101 pi-Cation interactions: B:Y.37

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Crespi, G.A.N. et al., Crystallization and preliminary X-ray diffraction analysis of the Fab portion of the Alzheimer's disease immunotherapy candidate bapineuzumab complexed with amyloid-beta. ACTA CRYSTALLOGR.,SECT.F (2014)

Release Date

2015-01-28

Peptides

Humanised 3D6 Fab Heavy Chain: A
Humanised 3D6 Fab Light Chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

Humanised 3D6 Fab Heavy Chain

Humanised 3D6 Fab Light Chain

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