SMTL ID : 4ojk.1 (2 other biounits)

Structure of the cGMP Dependent Protein Kinase II and Rab11b Complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.66 Å

Oligo State

hetero-2-2-mer

Ligands

2 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 20 residues within 4Å: Chain A: D.14, S.15, G.16, V.17, G.18, K.19, S.20, N.21, F.31, N.32, L.33, E.34, K.36, N.119, K.120, D.122, L.123, S.149, A.150, L.151 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:G.16, A:V.17, A:G.18, A:K.19, A:S.20, A:S.20, A:S.20, A:N.21, A:N.21, A:N.32, A:K.36, A:N.119, A:K.120, A:K.120, A:A.150, A:L.151 Salt bridges: A:K.19, A:K.36, A:D.122 pi-Stacking: A:F.31 GDP.2: 19 residues within 4Å: Chain C: D.14, S.15, G.16, V.17, G.18, K.19, S.20, N.21, F.31, N.32, L.33, E.34, N.119, K.120, D.122, L.123, S.149, A.150, L.151 18 PLIP interactions: 18 interactions with chain C Hydrogen bonds: C:G.16, C:V.17, C:G.18, C:K.19, C:S.20, C:N.21, C:N.21, C:N.32, C:E.34, C:N.119, C:K.120, C:K.120, C:S.149, C:A.150, C:L.151 Salt bridges: C:K.19, C:D.122 pi-Stacking: C:F.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Reger, A.S. et al., Crystal Structure of the cGMP-dependent Protein Kinase II Leucine Zipper and Rab11b Protein Complex Reveals Molecular Details of G-kinase-specific Interactions. J.Biol.Chem. (2014)

Release Date

2014-08-06

Peptides

Ras-related protein Rab-11B: AC
cGMP-dependent protein kinase 2: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
B

B
C

D
D

Ras-related protein Rab-11B

cGMP-dependent protein kinase 2

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