SMTL ID : 4ojm.1

Crystal structure of a C-terminally truncated CYT-18 protein including N-terminal residues

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

homo-dimer

Ligands

2 x TYR: TYROSINE(Non-covalent)

TYR.1: 11 residues within 4Å: Chain A: Y.68, G.70, D.72, L.102, T.107, D.112, Y.216, Q.220, D.223, Q.236, Q.242 9 PLIP interactions: 9 interactions with chain A, Hydrophobic interactions: A:Y.68, A:T.107, A:Q.220 Hydrogen bonds: A:Y.68, A:Y.68, A:D.112, A:Q.220, A:Q.242 Water bridges: A:D.72 TYR.2: 11 residues within 4Å: Chain B: Y.68, G.70, D.72, L.102, T.107, D.112, Y.216, Q.220, D.223, Q.236, Q.242 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:Y.68, B:T.107, B:Q.220 Hydrogen bonds: B:Y.68, B:D.112, B:D.112, B:Y.216, B:Q.220, B:D.223, B:Q.242 Water bridges: B:D.72

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Geng, C. et al., An in Vitro Peptide Complementation Assay for CYT-18-Dependent Group I Intron Splicing Reveals a New Role for the N-Terminus. Biochemistry (2014)

Release Date

2014-04-16

Peptides

Tyrosine--tRNA ligase, mitochondrial: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

B
X

Tyrosine--tRNA ligase, mitochondrial

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