SMTL ID : 4ojn.1 (1 other biounit)

Crystal structure of human muscle L-lactate dehydrogenase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-tetramer

Ligands

4 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)

1PE.1: 9 residues within 4Å: Chain A: V.30, T.94, G.96, A.97, V.135, S.136, N.137, A.237, T.247 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.137, A:N.137 Water bridges: A:R.168, A:H.192 1PE.2: 9 residues within 4Å: Chain B: V.30, T.94, A.97, V.135, S.136, N.137, A.237, I.241, T.247 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.137, B:T.247 1PE.3: 8 residues within 4Å: Chain C: V.30, T.94, A.97, V.135, S.136, N.137, I.241, T.247 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:N.137, C:N.137 1PE.4: 7 residues within 4Å: Chain D: V.30, T.94, A.97, V.135, S.136, N.137, T.247 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:N.137, D:N.137, D:T.247

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 7 residues within 4Å: Chain B: R.170, H.185, W.187, V.269 Chain D: S.183, H.185, A.206 8 PLIP interactions: 3 interactions with chain D, 5 interactions with chain B Hydrogen bonds: D:S.183, D:A.206, B:R.170, B:R.170, B:H.185, B:V.269, B:V.269 Water bridges: D:G.207 GOL.6: 1 residues within 4Å: Chain D: N.83 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kolappan, S. et al., Structures of lactate dehydrogenase A (LDHA) in apo, ternary and inhibitor-bound forms. Acta Crystallogr.,Sect.D (2015)

Release Date

2014-12-03

Peptides

L-lactate dehydrogenase A chain: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

L-lactate dehydrogenase A chain

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