SMTL ID : 4ok3.1

Crystal Structure of Hepatitis C Virus NS3 Helicase Inhibitor Co-complex with Compound 7 [[1-(3-chlorobenzyl)-1H-indol-3-yl]acetic acid]

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

1 x 2SY: [1-(3-chlorobenzyl)-1H-indol-3-yl]acetic acid(Non-covalent)

2SY.1: 13 residues within 4Å: Chain A: V.66, T.88, G.89, T.103, G.105, K.106, A.109, A.131, T.132, E.327, A.331, W.335, Y.336 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:A.109, A:A.131, A:W.335, A:Y.336, A:Y.336 Hydrogen bonds: A:G.89, A:T.103

2 x CA: CALCIUM ION(Non-covalent)

CA.2: 3 residues within 4Å: Chain A: D.271 Chain B: D.271 Ligands: CA.3 5 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: B:D.271, A:D.271, A:D.271, H2O.2, H2O.4 CA.3: 4 residues within 4Å: Chain A: D.271, E.281 Chain B: D.271 Ligands: CA.2 4 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B, 1 Ligand-Water interactions Metal complexes: A:D.271, A:E.281, B:D.271, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Laplante, S.R. et al., Integrated strategies for identifying leads that target the NS3 helicase of the hepatitis C virus. J.Med.Chem. (2014)

Release Date

2014-03-05

Peptides

Serine protease NS3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine protease NS3

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