SMTL ID : 4okh.2 (1 other biounit)

Crystal structure of calpain-3 penta-EF-hand domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.45 Å

Oligo State

homo-dimer

Ligands

6 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: E.27, D.65, D.67, S.69, K.71, E.76 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.65, A:D.67, A:S.69, A:K.71, H2O.1 CA.2: 4 residues within 4Å: Chain A: D.95, D.97, S.99, T.101 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.95, A:D.97, A:S.99, H2O.1, H2O.1 CA.3: 5 residues within 4Å: Chain A: D.160, D.162, D.164, I.166, K.168 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.160, A:D.162, A:I.166, H2O.1 CA.4: 6 residues within 4Å: Chain B: E.27, D.65, D.67, S.69, K.71, E.76 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.65, B:D.67, B:S.69, B:K.71, H2O.1 CA.5: 4 residues within 4Å: Chain B: D.95, D.97, S.99, T.101 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.95, B:D.97, B:S.99, H2O.1, H2O.1 CA.6: 5 residues within 4Å: Chain B: D.160, D.162, D.164, I.166, K.168 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.160, B:D.162, B:I.166, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Partha, S.K. et al., Crystal structure of calpain-3 penta-EF-hand (PEF) domain - a homodimerized PEF family member with calcium bound at the fifth EF-hand. Febs J. (2014)

Release Date

2014-05-28

Peptides

Calpain-3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
C

Calpain-3

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