SMTL ID : 4ole.5 (4 other biounits)

Crystal structure of a neighbor of BRCA1 gene 1 (NBR1) from Homo sapiens at 2.52 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.52 Å

Oligo State

homo-16-mer

Ligands

28 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 8 residues within 4Å: Chain A: W.53, T.93, H.95 Chain L: W.53, T.93, H.95 Ligands: EDO.3, EDO.49 Ligand excluded by PLIP SO4.2: 2 residues within 4Å: Chain A: K.72, H.75 Ligand excluded by PLIP SO4.5: 8 residues within 4Å: Chain B: W.53, T.93, H.95 Chain O: W.53, T.93, H.95 Ligands: EDO.7, EDO.61 Ligand excluded by PLIP SO4.6: 2 residues within 4Å: Chain B: K.72, H.75 Ligand excluded by PLIP SO4.9: 8 residues within 4Å: Chain C: W.53, T.93, H.95 Chain I: W.53, T.93, H.95 Ligands: EDO.11, EDO.37 Ligand excluded by PLIP SO4.10: 2 residues within 4Å: Chain C: K.72, H.75 Ligand excluded by PLIP SO4.13: 8 residues within 4Å: Chain D: W.53, T.93, H.95 Chain F: W.53, T.93, H.95 Ligands: EDO.15, EDO.25 Ligand excluded by PLIP SO4.14: 2 residues within 4Å: Chain D: K.72, H.75 Ligand excluded by PLIP SO4.17: 7 residues within 4Å: Chain E: W.53, T.93, H.95 Chain G: W.53, T.93, H.95 Ligands: EDO.20 Ligand excluded by PLIP SO4.18: 1 residues within 4Å: Chain E: K.36 Ligand excluded by PLIP SO4.19: 2 residues within 4Å: Chain E: K.72, H.75 Ligand excluded by PLIP SO4.23: 3 residues within 4Å: Chain F: K.50, S.99, G.102 Ligand excluded by PLIP SO4.24: 6 residues within 4Å: Chain E: A.10, G.106, P.107 Chain F: V.4, M.5, N.40 Ligand excluded by PLIP SO4.29: 7 residues within 4Å: Chain H: W.53, T.93, H.95 Chain J: W.53, T.93, H.95 Ligands: EDO.32 Ligand excluded by PLIP SO4.30: 1 residues within 4Å: Chain H: K.36 Ligand excluded by PLIP SO4.31: 2 residues within 4Å: Chain H: K.72, H.75 Ligand excluded by PLIP SO4.35: 3 residues within 4Å: Chain I: K.50, S.99, G.102 Ligand excluded by PLIP SO4.36: 6 residues within 4Å: Chain H: A.10, G.106, P.107 Chain I: V.4, M.5, N.40 Ligand excluded by PLIP SO4.41: 7 residues within 4Å: Chain K: W.53, T.93, H.95 Chain M: W.53, T.93, H.95 Ligands: EDO.44 Ligand excluded by PLIP SO4.42: 1 residues within 4Å: Chain K: K.36 Ligand excluded by PLIP SO4.43: 2 residues within 4Å: Chain K: K.72, H.75 Ligand excluded by PLIP SO4.47: 3 residues within 4Å: Chain L: K.50, S.99, G.102 Ligand excluded by PLIP SO4.48: 6 residues within 4Å: Chain K: A.10, G.106, P.107 Chain L: V.4, M.5, N.40 Ligand excluded by PLIP SO4.53: 7 residues within 4Å: Chain N: W.53, T.93, H.95 Chain P: W.53, T.93, H.95 Ligands: EDO.56 Ligand excluded by PLIP SO4.54: 1 residues within 4Å: Chain N: K.36 Ligand excluded by PLIP SO4.55: 2 residues within 4Å: Chain N: K.72, H.75 Ligand excluded by PLIP SO4.59: 3 residues within 4Å: Chain O: K.50, S.99, G.102 Ligand excluded by PLIP SO4.60: 6 residues within 4Å: Chain N: A.10, G.106, P.107 Chain O: V.4, M.5, N.40 Ligand excluded by PLIP

36 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 7 residues within 4Å: Chain A: T.93, H.95, W.110, S.112 Chain L: T.91 Ligands: SO4.1, EDO.49 Ligand excluded by PLIP EDO.4: 5 residues within 4Å: Chain A: N.40, V.41, K.42 Chain O: A.87, L.88 Ligand excluded by PLIP EDO.7: 7 residues within 4Å: Chain B: T.93, H.95, W.110, S.112 Chain O: T.91 Ligands: SO4.5, EDO.61 Ligand excluded by PLIP EDO.8: 5 residues within 4Å: Chain B: N.40, V.41, K.42 Chain L: A.87, L.88 Ligand excluded by PLIP EDO.11: 7 residues within 4Å: Chain C: T.93, H.95, W.110, S.112 Chain I: T.91 Ligands: SO4.9, EDO.37 Ligand excluded by PLIP EDO.12: 5 residues within 4Å: Chain C: N.40, V.41, K.42 Chain F: A.87, L.88 Ligand excluded by PLIP EDO.15: 7 residues within 4Å: Chain D: T.93, H.95, W.110, S.112 Chain F: T.91 Ligands: SO4.13, EDO.25 Ligand excluded by PLIP EDO.16: 5 residues within 4Å: Chain D: N.40, V.41, K.42 Chain I: A.87, L.88 Ligand excluded by PLIP EDO.20: 6 residues within 4Å: Chain E: T.93, H.95, W.110 Chain G: T.91, T.93 Ligands: SO4.17 Ligand excluded by PLIP EDO.21: 4 residues within 4Å: Chain D: A.87 Chain E: N.40, V.41, K.42 Ligand excluded by PLIP EDO.22: 2 residues within 4Å: Chain E: Q.103 Chain F: Q.103 Ligand excluded by PLIP EDO.25: 6 residues within 4Å: Chain D: T.91 Chain F: T.93, W.110, S.112 Ligands: SO4.13, EDO.15 Ligand excluded by PLIP EDO.26: 6 residues within 4Å: Chain G: D.14, E.15, N.16, H.32, R.34 Ligands: EDO.27 Ligand excluded by PLIP EDO.27: 3 residues within 4Å: Chain G: N.16, H.32 Ligands: EDO.26 Ligand excluded by PLIP EDO.28: 3 residues within 4Å: Chain G: N.16, L.17, P.18 Ligand excluded by PLIP EDO.32: 6 residues within 4Å: Chain H: T.93, H.95, W.110 Chain J: T.91, T.93 Ligands: SO4.29 Ligand excluded by PLIP EDO.33: 4 residues within 4Å: Chain C: A.87 Chain H: N.40, V.41, K.42 Ligand excluded by PLIP EDO.34: 2 residues within 4Å: Chain H: Q.103 Chain I: Q.103 Ligand excluded by PLIP EDO.37: 6 residues within 4Å: Chain C: T.91 Chain I: T.93, W.110, S.112 Ligands: SO4.9, EDO.11 Ligand excluded by PLIP EDO.38: 6 residues within 4Å: Chain J: D.14, E.15, N.16, H.32, R.34 Ligands: EDO.39 Ligand excluded by PLIP EDO.39: 3 residues within 4Å: Chain J: N.16, H.32 Ligands: EDO.38 Ligand excluded by PLIP EDO.40: 3 residues within 4Å: Chain J: N.16, L.17, P.18 Ligand excluded by PLIP EDO.44: 6 residues within 4Å: Chain K: T.93, H.95, W.110 Chain M: T.91, T.93 Ligands: SO4.41 Ligand excluded by PLIP EDO.45: 4 residues within 4Å: Chain A: A.87 Chain K: N.40, V.41, K.42 Ligand excluded by PLIP EDO.46: 2 residues within 4Å: Chain K: Q.103 Chain L: Q.103 Ligand excluded by PLIP EDO.49: 6 residues within 4Å: Chain A: T.91 Chain L: T.93, W.110, S.112 Ligands: SO4.1, EDO.3 Ligand excluded by PLIP EDO.50: 6 residues within 4Å: Chain M: D.14, E.15, N.16, H.32, R.34 Ligands: EDO.51 Ligand excluded by PLIP EDO.51: 3 residues within 4Å: Chain M: N.16, H.32 Ligands: EDO.50 Ligand excluded by PLIP EDO.52: 3 residues within 4Å: Chain M: N.16, L.17, P.18 Ligand excluded by PLIP EDO.56: 6 residues within 4Å: Chain N: T.93, H.95, W.110 Chain P: T.91, T.93 Ligands: SO4.53 Ligand excluded by PLIP EDO.57: 4 residues within 4Å: Chain B: A.87 Chain N: N.40, V.41, K.42 Ligand excluded by PLIP EDO.58: 2 residues within 4Å: Chain N: Q.103 Chain O: Q.103 Ligand excluded by PLIP EDO.61: 6 residues within 4Å: Chain B: T.91 Chain O: T.93, W.110, S.112 Ligands: SO4.5, EDO.7 Ligand excluded by PLIP EDO.62: 6 residues within 4Å: Chain P: D.14, E.15, N.16, H.32, R.34 Ligands: EDO.63 Ligand excluded by PLIP EDO.63: 3 residues within 4Å: Chain P: N.16, H.32 Ligands: EDO.62 Ligand excluded by PLIP EDO.64: 3 residues within 4Å: Chain P: N.16, L.17, P.18 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of a neighbor of BRCA1 gene 1 (NBR1) from Homo sapiens at 2.52 A resolution. To be published

Release Date

2014-02-19

Peptides

Next to BRCA1 gene 1 protein: ABCDEFGHIJKLMNOP

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
D

C
D

D
D

E
A

F
B

G
C

H
A

I
B

J
C

K
A

L
B

M
C

N
A

O
B

P
C

Next to BRCA1 gene 1 protein

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