SMTL ID : 4ols.4 (3 other biounits)

The amidase-2 domain of LysGH15

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.27 Å

Oligo State

monomer

Ligands

3 x ZN: ZINC ION(Non-functional Binders)(Non-covalent)

ZN.1: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) ZN.2: 1 residues within 4Å: Chain A: R.58 No protein-ligand interaction detected (PLIP) ZN.3: 3 residues within 4Å: Chain A: H.53, H.163, C.171 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.53, A:H.163, A:C.171, H2O.4

1 x MG: MAGNESIUM ION(Non-covalent)

MG.4: 4 residues within 4Å: Chain A: W.102, H.103, G.105, N.114 No protein-ligand interaction detected (PLIP)

1 x FE: FE (III) ION(Non-covalent)

FE.5: 4 residues within 4Å: Chain A: G.109, A.110, N.111, S.112 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gu, J. et al., Structural and biochemical characterization reveals LysGH15 as an unprecedented "EF-hand-like" calcium-binding phage lysin. Plos Pathog. (2014)

Release Date

2014-06-04

Peptides

Endolysin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

Endolysin

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