SMTL ID : 4oon.1

Crystal structure of PBP1a in complex with compound 17 ((4Z,8S,11E,14S)-5-(2-amino-1,3-thiazol-4-yl)-14-(5,6-dihydroxy-1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)-8-formyl-2-methyl-6-oxo-3,10-dioxa-4,7,11-triazatetradeca-4,11-diene-2,12,14-tricarboxylic acid)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

monomer

Ligands

1 x 2U4: (4Z,8S,11E,14S)-5-(2-amino-1,3-thiazol-4-yl)-14-(5,6-dihydroxy-1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)-8-formyl-2-methyl-6-oxo-3,10-dioxa-4,7,11-triazatetradeca-4,11-diene-2,12,14-tricarboxylic acid(Covalent)

2U4.1: 16 residues within 4Å: Chain A: Q.431, G.433, S.434, S.493, N.495, L.532, G.533, T.534, T.653, T.669, G.670, T.671, T.672, N.673, D.674, Y.706 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:T.671 Hydrogen bonds: A:Q.431, A:S.434, A:S.493, A:N.495, A:T.671, A:T.671, A:T.671, A:N.673, A:D.674, A:Y.706 Water bridges: A:T.671, A:G.708 Salt bridges: A:K.668 pi-Stacking: A:Y.706, A:Y.706

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Starr, J. et al., Siderophore receptor-mediated uptake of lactivicin analogues in gram-negative bacteria. J.Med.Chem. (2014)

Release Date

2014-05-07

Peptides

Penicillin-binding protein 1A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Penicillin-binding protein 1A