SMTL ID : 4ooz.1 (1 other biounit)

Crystal structure of beta-1,4-D-mannanase from Cryptopygus antarcticus in complex with mannopentaose

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x BMA- BMA- BMA- BMA: beta-D-mannopyranose-(1-4)-beta-D-mannopyranose-(1-4)-beta-D-mannopyranose-(1-4)-beta-D-mannopyranose

BMA-BMA-BMA-BMA.1: 8 residues within 4Å: Chain A: A.203, Q.204, G.205, W.208, W.243, Y.282, H.284 Ligands: BMA.3 No protein-ligand interaction detected (PLIP)

1 x BMA- BMA- BMA- BMA- BMA: beta-D-mannopyranose-(1-4)-beta-D-mannopyranose-(1-4)-beta-D-mannopyranose-(1-4)-beta-D-mannopyranose-(1-4)-beta-D-mannopyranose(Non-covalent)

BMA-BMA-BMA-BMA-BMA.2: 6 residues within 4Å: Chain A: N.144, W.147, D.148, S.150, K.151, Q.187 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.187, A:Q.187

1 x BMA: beta-D-mannopyranose(Non-covalent)

BMA.3: 8 residues within 4Å: Chain A: W.83, N.180, E.181, W.208, E.312, W.341, D.348 Ligands: BMA-BMA-BMA-BMA.1 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.180, A:N.180, A:E.181, A:E.312, A:D.348

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, M.K. et al., Structure-based investigation into the functional roles of the extended loop and substrate-recognition sites in an endo-beta-1,4-d-mannanase from the Antarctic springtail, Cryptopygus antarcticus. Proteins (2014)

Release Date

2014-08-06

Peptides

Beta-1,4-mannanase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-1,4-mannanase

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