SMTL ID : 4opn.1

Crystal structure of mouse glyoxalase I complexed with mAH

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: Q.34, E.100 Chain B: H.127, E.173 Ligands: ZBF.4 3 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A, 1 Ligand-Ligand interactions Metal complexes: B:H.127, A:E.100, ZBF.4 ZN.3: 5 residues within 4Å: Chain A: H.127, E.173 Chain B: Q.34, E.100 Ligands: ZBF.2 3 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B, 1 Ligand-Ligand interactions Metal complexes: A:H.127, B:E.100, ZBF.2

2 x ZBF: L-gamma-glutamyl-N-(3-ethynylphenyl)-N-hydroxy-L-glutaminylglycine(Non-covalent)

ZBF.2: 21 residues within 4Å: Chain A: R.123, H.127, K.151, G.156, K.157, M.158, L.161, F.163, E.173, L.175, I.180 Chain B: Q.34, R.38, L.61, F.68, L.70, F.93, E.100, T.102, N.104 Ligands: ZN.3 25 PLIP interactions: 10 interactions with chain B, 15 interactions with chain A Hydrophobic interactions: B:L.61, B:F.68, B:F.68, B:F.93, B:F.93, B:T.102, A:L.161, A:L.175, A:I.180, A:I.180, A:I.180 Hydrogen bonds: B:N.104, B:N.104, B:N.104, A:K.157, A:K.157, A:M.158 Salt bridges: B:R.38, A:R.123, A:K.151, A:K.157 Water bridges: A:R.123, A:R.123, A:R.123, A:R.123 ZBF.4: 21 residues within 4Å: Chain A: Q.34, M.36, R.38, F.68, L.70, F.93, E.100, T.102, N.104 Chain B: R.123, H.127, K.151, G.156, K.157, M.158, L.161, F.163, E.173, L.175, A.181 Ligands: ZN.1 19 PLIP interactions: 9 interactions with chain B, 10 interactions with chain A Hydrophobic interactions: B:L.161, B:F.163, B:L.175, A:F.68, A:F.68, A:L.70, A:F.93, A:F.93, A:T.102 Hydrogen bonds: B:R.123, B:K.157, B:K.157, B:M.158, A:N.104, A:N.104 Salt bridges: B:R.123, B:K.151, A:R.38 Water bridges: A:R.38

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shi, Q. et al., Reversible Inhibition of Glyoxalase I: Synthesis and Activity Evaluation. To be Published

Release Date

2015-02-11

Peptides

Lactoylglutathione lyase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Lactoylglutathione lyase

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