- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.49 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)
- 3 x FLC: CITRATE ANION(Non-covalent)
FLC.2: 7 residues within 4Å:- Chain A: W.119, Y.121
- Chain B: Y.66, H.110, R.111
- Ligands: PG4.1, IPA.3
6 PLIP interactions:4 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:W.119
- Hydrogen bonds: A:Y.121, A:Y.121
- Water bridges: A:S.117
- Salt bridges: B:H.110, B:R.111
FLC.7: 7 residues within 4Å:- Chain B: W.119, Y.121
- Chain C: Y.66, H.110, R.111
- Ligands: PG4.6, IPA.8
6 PLIP interactions:2 interactions with chain C, 4 interactions with chain B- Salt bridges: C:H.110, C:R.111
- Hydrophobic interactions: B:W.119
- Hydrogen bonds: B:Y.121, B:Y.121
- Water bridges: B:S.117
FLC.12: 7 residues within 4Å:- Chain A: Y.66, H.110, R.111
- Chain C: W.119, Y.121
- Ligands: PG4.11, IPA.13
6 PLIP interactions:4 interactions with chain C, 2 interactions with chain A- Hydrophobic interactions: C:W.119
- Hydrogen bonds: C:Y.121, C:Y.121
- Water bridges: C:S.117
- Salt bridges: A:H.110, A:R.111
- 9 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)
IPA.3: 3 residues within 4Å:- Ligands: PG4.1, FLC.2, IPA.4
No protein-ligand interaction detected (PLIP)IPA.4: 2 residues within 4Å:- Ligands: PG4.1, IPA.3
No protein-ligand interaction detected (PLIP)IPA.5: 4 residues within 4Å:- Chain A: K.71, Q.98, F.100, D.103
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:F.100, A:F.100
- Hydrogen bonds: A:K.71
IPA.8: 3 residues within 4Å:- Ligands: PG4.6, FLC.7, IPA.9
No protein-ligand interaction detected (PLIP)IPA.9: 2 residues within 4Å:- Ligands: PG4.6, IPA.8
No protein-ligand interaction detected (PLIP)IPA.10: 4 residues within 4Å:- Chain B: K.71, Q.98, F.100, D.103
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:F.100, B:F.100
- Hydrogen bonds: B:K.71
IPA.13: 3 residues within 4Å:- Ligands: PG4.11, FLC.12, IPA.14
No protein-ligand interaction detected (PLIP)IPA.14: 2 residues within 4Å:- Ligands: PG4.11, IPA.13
No protein-ligand interaction detected (PLIP)IPA.15: 4 residues within 4Å:- Chain C: K.71, Q.98, F.100, D.103
3 PLIP interactions:3 interactions with chain C- Hydrophobic interactions: C:F.100, C:F.100
- Hydrogen bonds: C:K.71
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Miao, H. et al., Structural insights into the C1q domain of Caprin-2 in canonical Wnt signaling. J.Biol.Chem. (2014)
- Release Date
- 2014-10-29
- Peptides
- Caprin-2: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.49 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)
- 3 x FLC: CITRATE ANION(Non-covalent)
- 9 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Miao, H. et al., Structural insights into the C1q domain of Caprin-2 in canonical Wnt signaling. J.Biol.Chem. (2014)
- Release Date
- 2014-10-29
- Peptides
- Caprin-2: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A