- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.84 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
NAD.1: 25 residues within 4Å:- Chain A: G.34, I.35, I.36, S.40, I.41, F.61, L.83, D.84, V.85, S.114, I.115, G.116, I.142, M.167, D.168, F.169, M.181, K.185, A.211, G.212, P.213, I.214, T.216, A.218
- Ligands: 1S5.2
20 PLIP interactions:20 interactions with chain A- Hydrophobic interactions: A:I.41, A:F.169, A:A.211
- Hydrogen bonds: A:G.34, A:I.41, A:D.84, A:V.85, A:I.115, A:G.116, A:K.185, A:I.214, A:I.214, A:T.216, A:T.216
- Water bridges: A:G.34, A:A.42, A:F.61, A:F.61, A:I.115
- pi-Stacking: A:F.61
NAD.3: 25 residues within 4Å:- Chain B: G.34, I.35, I.36, S.40, I.41, F.61, L.83, D.84, V.85, S.114, I.115, G.116, I.142, M.167, D.168, F.169, M.181, K.185, A.211, G.212, P.213, I.214, T.216, A.218
- Ligands: 1S5.4
22 PLIP interactions:22 interactions with chain B- Hydrophobic interactions: B:I.41, B:F.169, B:F.169, B:A.211
- Hydrogen bonds: B:G.34, B:I.41, B:D.84, B:V.85, B:I.115, B:G.116, B:K.185, B:I.214, B:I.214, B:T.216, B:T.216, B:A.218
- Water bridges: B:G.34, B:A.42, B:F.61, B:I.115, B:L.217
- pi-Stacking: B:F.61
NAD.7: 25 residues within 4Å:- Chain C: G.34, I.35, I.36, S.40, I.41, F.61, L.83, D.84, V.85, S.114, I.115, G.116, I.142, M.167, D.168, F.169, M.181, K.185, A.211, G.212, P.213, I.214, T.216, A.218
- Ligands: 1S5.8
22 PLIP interactions:22 interactions with chain C- Hydrophobic interactions: C:I.41, C:F.169, C:F.169, C:A.211
- Hydrogen bonds: C:G.34, C:I.41, C:D.84, C:D.84, C:V.85, C:I.115, C:G.116, C:K.185, C:I.214, C:I.214, C:T.216, C:A.218
- Water bridges: C:G.34, C:A.42, C:F.61, C:I.115, C:L.217
- pi-Stacking: C:F.61
NAD.9: 25 residues within 4Å:- Chain D: G.34, I.35, I.36, S.40, I.41, F.61, L.83, D.84, V.85, S.114, I.115, G.116, I.142, M.167, D.168, F.169, M.181, K.185, A.211, G.212, P.213, I.214, T.216, A.218
- Ligands: 1S5.10
22 PLIP interactions:22 interactions with chain D- Hydrophobic interactions: D:I.41, D:F.169, D:F.169, D:A.211
- Hydrogen bonds: D:G.34, D:I.41, D:D.84, D:D.84, D:V.85, D:I.115, D:G.116, D:K.185, D:I.214, D:I.214, D:T.216, D:A.218
- Water bridges: D:G.34, D:A.42, D:F.61, D:I.115, D:L.217
- pi-Stacking: D:F.61
- 4 x 1S5: 5-(4-amino-2-methylphenoxy)-2-hexyl-4-hydroxy-1-methylpyridinium(Non-covalent)
1S5.2: 15 residues within 4Å:- Chain A: G.116, F.117, M.118, M.123, F.169, P.176, A.177, Y.178, M.181, K.185, I.214, A.218, M.219, L.238
- Ligands: NAD.1
8 PLIP interactions:8 interactions with chain A- Hydrophobic interactions: A:F.169, A:A.177, A:Y.178, A:Y.178, A:A.218, A:L.238
- Hydrogen bonds: A:M.118, A:M.118
1S5.4: 14 residues within 4Å:- Chain B: G.116, F.117, M.118, F.169, M.175, P.176, Y.178, M.181, K.185, A.218, M.219, A.221, I.222
- Ligands: NAD.3
7 PLIP interactions:7 interactions with chain B- Hydrophobic interactions: B:F.169, B:Y.178, B:A.218, B:A.221, B:I.222
- Hydrogen bonds: B:M.118, B:M.118
1S5.8: 15 residues within 4Å:- Chain C: G.116, F.117, M.118, F.169, M.175, P.176, Y.178, M.181, K.185, I.214, A.218, M.219, I.235, L.238
- Ligands: NAD.7
10 PLIP interactions:10 interactions with chain C- Hydrophobic interactions: C:F.169, C:F.169, C:Y.178, C:A.218, C:I.235, C:L.238, C:L.238
- Hydrogen bonds: C:M.118, C:M.118, C:Y.178
1S5.10: 16 residues within 4Å:- Chain D: G.116, F.117, M.118, M.123, F.169, M.175, P.176, Y.178, M.181, K.185, I.214, A.218, M.219, I.235, L.238
- Ligands: NAD.9
8 PLIP interactions:8 interactions with chain D- Hydrophobic interactions: D:F.169, D:Y.178, D:Y.178, D:A.218, D:L.238
- Hydrogen bonds: D:M.118, D:M.118, D:Y.178
- 2 x 2NV: 3,6,9,12,15-pentaoxaoctadecan-17-amine(Non-covalent)
2NV.5: 5 residues within 4Å:- Chain B: L.237, G.241, W.242, R.245
- Ligands: 2NV.6
1 PLIP interactions:1 interactions with chain B- Hydrophobic interactions: B:W.242
2NV.6: 2 residues within 4Å:- Chain B: Q.234
- Ligands: 2NV.5
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Li, H.J. et al., A Structural and Energetic Model for the Slow-Onset Inhibition of the Mycobacterium tuberculosis Enoyl-ACP Reductase InhA. Acs Chem.Biol. (2014)
- Release Date
- 2014-04-30
- Peptides
- Enoyl-[acyl-carrier-protein] reductase [NADH]: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.84 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 4 x 1S5: 5-(4-amino-2-methylphenoxy)-2-hexyl-4-hydroxy-1-methylpyridinium(Non-covalent)
- 2 x 2NV: 3,6,9,12,15-pentaoxaoctadecan-17-amine(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Li, H.J. et al., A Structural and Energetic Model for the Slow-Onset Inhibition of the Mycobacterium tuberculosis Enoyl-ACP Reductase InhA. Acs Chem.Biol. (2014)
- Release Date
- 2014-04-30
- Peptides
- Enoyl-[acyl-carrier-protein] reductase [NADH]: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D