SMTL ID : 4ozh.1 (1 other biounit)

S16 protein complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-1-1-1-1-1-mer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: N.120, E.168, H.169, W.170 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.120 NAG.2: 1 residues within 4Å: Chain A: N.80 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.80

1 x CA: CALCIUM ION(Non-covalent)

CA.3: 1 residues within 4Å: Chain C: I.111 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:I.111

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Petersen, J. et al., T-cell receptor recognition of HLA-DQ2-gliadin complexes associated with celiac disease. Nat.Struct.Mol.Biol. (2014)

Release Date

2014-04-16

Peptides

HLA class II histocompatibility antigen, DQ alpha 1 chain: A
HLA class II histocompatibility antigen, DQ beta 1 chain: B
T-cell receptor, s16, alpha chain: C
T-cell receptor, s16, beta chain: D
Gliadin-alpha2 peptide: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
G

D
H

E
J

HLA class II histocompatibility antigen, DQ alpha 1 chain

HLA class II histocompatibility antigen, DQ beta 1 chain

T-cell receptor, s16, alpha chain

T-cell receptor, s16, beta chain

Gliadin-alpha2 peptide

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