SMTL ID : 4p2f.1

Monomeric form of a single mutant (F363R) of Mycobacterial Adenylyl cyclase Rv1625c

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

18 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 2 residues within 4Å: Chain A: R.108, S.111 Ligand excluded by PLIP EDO.2: 9 residues within 4Å: Chain A: E.123, V.135, S.136, G.137, V.138, P.139, R.140, R.142 Ligands: EDO.12 Ligand excluded by PLIP EDO.3: 8 residues within 4Å: Chain A: L.154, T.157, N.158, G.214, Q.215, I.216, L.251, I.252 Ligand excluded by PLIP EDO.4: 4 residues within 4Å: Chain A: F.105, R.108, L.163, K.164 Ligand excluded by PLIP EDO.5: 4 residues within 4Å: Chain A: E.115, D.118, Q.119 Ligands: EDO.6 Ligand excluded by PLIP EDO.6: 4 residues within 4Å: Chain A: D.118, Q.119, G.121 Ligands: EDO.5 Ligand excluded by PLIP EDO.7: 7 residues within 4Å: Chain A: A.74, D.75, Y.77, P.139, A.184, G.185, Y.194 Ligand excluded by PLIP EDO.8: 3 residues within 4Å: Chain A: K.76, Y.77, D.78 Ligand excluded by PLIP EDO.9: 4 residues within 4Å: Chain A: D.114, V.117, D.118, K.124 Ligand excluded by PLIP EDO.10: 7 residues within 4Å: Chain A: R.206, M.207, P.219, D.220, M.246, R.247, T.248 Ligand excluded by PLIP EDO.11: 2 residues within 4Å: Chain A: V.203, R.206 Ligand excluded by PLIP EDO.12: 4 residues within 4Å: Chain A: R.140, P.141, R.142 Ligands: EDO.2 Ligand excluded by PLIP EDO.13: 7 residues within 4Å: Chain A: Y.223, K.227, F.230, V.231, L.232, R.233, K.255 Ligand excluded by PLIP EDO.14: 6 residues within 4Å: Chain A: Q.217, R.235, G.236, I.238, M.246, T.248 Ligand excluded by PLIP EDO.15: 8 residues within 4Å: Chain A: F.84, V.127, M.133, R.193, D.195, V.196, W.197, V.201 Ligand excluded by PLIP EDO.16: 3 residues within 4Å: Chain A: E.69, N.71 Ligands: EDO.18 Ligand excluded by PLIP EDO.17: 5 residues within 4Å: Chain A: D.107, Y.110, S.111, D.114, K.124 Ligand excluded by PLIP EDO.18: 3 residues within 4Å: Chain A: N.71, W.197 Ligands: EDO.16 Ligand excluded by PLIP

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.19: 2 residues within 4Å: Chain A: Q.119, H.120 2 PLIP interactions: 2 interactions with chain A Water bridges: A:Q.119, A:H.120

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.20: 4 residues within 4Å: Chain A: L.154, N.158, G.253, R.254 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.254, A:R.254, A:R.254

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Barathy, D. et al., New structural forms of a mycobacterial adenylyl cyclase Rv1625c. Iucrj (2014)

Release Date

2014-09-17

Peptides

Adenylate cyclase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Adenylate cyclase