SMTL ID : 4p2x.1

Swapped Dimer of Mycobacterial Adenylyl cyclase Rv1625c: Form 2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 1 residues within 4Å: Chain A: R.219 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.219

4 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 5 residues within 4Å: Chain A: Q.199, L.235, I.236 Chain B: L.138, T.141 4 PLIP interactions: 1 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:T.141, A:Q.199 Water bridges: A:I.200, A:L.235 PEG.3: 7 residues within 4Å: Chain A: Y.61, D.62, E.63, G.121, P.125, R.126, H.129 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.62, A:R.126, A:R.126 PEG.5: 7 residues within 4Å: Chain B: G.105, S.120, G.121, V.122, P.123, R.124, R.126 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:G.121, B:V.122, B:R.124, B:R.126 PEG.6: 1 residues within 4Å: Chain B: F.176 No protein-ligand interaction detected (PLIP)

1 x MG: MAGNESIUM ION(Non-covalent)

MG.4: 4 residues within 4Å: Chain A: D.59, Y.61, A.168, G.169 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.59, A:Y.61, A:A.168

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.7: 6 residues within 4Å: Chain A: R.209 Chain B: P.127, D.128, H.129, T.130, Q.131 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Barathy, D. et al., New structural forms of a mycobacterial adenylyl cyclase Rv1625c. Iucrj (2014)

Release Date

2014-09-17

Peptides

Adenylate cyclase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Adenylate cyclase