SMTL ID : 4p59.1

HER3 extracellular domain in complex with Fab fragment of MOR09825

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.40 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 10 residues within 4Å: Chain A: E.38, R.62, R.84, C.224, F.225, A.226, C.227, N.231, G.234, C.236 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 1 residues within 4Å: Chain A: N.334 No protein-ligand interaction detected (PLIP)

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 6 residues within 4Å: Chain A: H.386, M.387, H.388, N.389, S.421, P.493 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:P.493 Hydrogen bonds: A:H.386, A:H.388 NAG.4: 5 residues within 4Å: Chain A: P.385, H.388, L.417, N.418, Q.442 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.417 Hydrogen bonds: A:L.417 NAG.5: 2 residues within 4Å: Chain A: R.369, N.395 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.426

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Garner, A.P. et al., An antibody that locks HER3 in the inactive conformation inhibits tumor growth driven by HER2 or neuregulin. Cancer Res. (2013)

Release Date

2014-04-16

Peptides

Receptor tyrosine-protein kinase erbB-3: A
MOR09825 Fab fragment heavy chain: B
MOR09825 Fab fragment light chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
H

C
L

Receptor tyrosine-protein kinase erbB-3

MOR09825 Fab fragment heavy chain

MOR09825 Fab fragment light chain